Project outputs
Progress
15%
November 2022 Kick-off
March 2027
Results
The European Genomic Data Infrastructure project releases Starter Kit to enable access across borders to genomic and phenotypic data. This release is the first version of the Starter Kit, which will be further developed during the lifetime of the project following an iterative approach.
The Starter Kit is accessible here: https://github.com/GenomicDataInfrastructure .
Deliverables and Milestones
Outputs are also published on the GDI Zenodo community.
Pillar I (WP2): Long-term sustainability
Code
Due
Description
Work Package
MS3
31 October 2025
Meetings with the particular stakeholders to collect best practises on addressing sustainability of European structures
WP2
MS4
30 April 2025
Agreement to move forward with establishment of legal framework
WP2
MS5
30 April 2026
Selection of host country for the central coordination of the 1+MG operations
WP2
Pillar II (WP3, Wp4, WP5 & WP6): 1+MG infrastructure deployment
Code
Due
Description
Work Package
MS6
30 June 2023
Early adopter nodes operational with synthetic data allowing access across borders
WP3
MS7
30 April 2024
Early adopter nodes operational with real genomic data allowing access across borders
WP3
MS8
31 October 2024
Demonstrator showing data access based on a pillar III use case
WP3
MS9
31 October 2026
Discovery and access to genomic data supported in 15 nodes
WP3
MS10
30 April 2023
List of groups and committees that oversee the day to day operation of the GDI
WP4
MS11
31 January 2024
User portal is accessible with synthetic data from early adopter nodes
WP4
MS12
31 October 2025
User portal is accessible with real data from production nodes and supports data access functionality
WP4
MS13
30 April 2025
Assessment of each node to check for compliance with the recommendations and SOPs defined for operations and data protection
WP4
MS14
28 February 2026
Assessment of each node to check for compliance with the recommendations and SOPs defined for operations and data protection
WP4
MS15
31 October 2023
List of metrics and indicators used to measure quality of service, TRL, and associated reporting processes
WP5
MS16
31 July 2023
Seminar to support knowledge transfer and gap / requirements analysis held
WP5
MS17
31 July 2024
Seminar to support knowledge transfer and gap / requirements analysis held
WP5
MS18
31 July 2025
Seminar to support knowledge transfer and gap / requirements analysis held
WP5
MS19
31 July 2026
Seminar to support knowledge transfer and gap / requirements analysis held
WP5
MS20
30 April 2024
Definition for procedures to elicit feedback from stakeholders into the infrastructure operations and development
WP5
MS21
31 July 2023
Workshop on best practice on maximising data quality and utility when preparing data for inclusion into the infrastructure
WP6
MS22
31 January 2024
Report on best practice on how to submit ELSI compliant data and maximise FAIRness
WP6
MS23
31 July 2024
Workshop on best practice on maximising data quality and utility with a focus on linking genomic data to other data types
WP6
MS24
31 July 2025
Workshop on best practice on maximising data quality and utility when preparing data for inclusion into the infrastructure
WP6
MS25
31 July 2026
Workshop on best practice on maximising data quality and utility with a focus on linking genomic data to other data types
WP6
Pillar III (WP7 & WP8): Application and innovation solutions
Code
Due
Description
Work Package
MS27
31 January 2024
Initial set of relevant data for use cases are identified
WP7
MS28
30 April 2025
Initial set of recommendations for addressing use cases
WP7
MS29
30 April 2026
Validated recommendations
WP7
MS30
31 July 2023
Federated data access scenarios
WP8
MS31
31 July 2024
Federated learning technologies
WP8
MS32
30 April 2025
Privacy-enhancing solutions
WP8
MS33
30 April 2024
Semantic interoperability scenarios
WP8
MS34
30 April 2025
Detecting innovation opportunities
WP8
Coordination and support
Code
Due
Description
Work Package
MS1
31 January 2023
Project mobilised
WP1
MS2
31 January 2023
GDI website goes live
WP1
MS35
30 September 2023
First Stakeholders forum - Stakeholder forum newsletter produced
WP1
MS36
30 September 2024
Second Stakeholders forum - Stakeholder forum newsletter produced
WP1
MS37
30 September 2025
Third Stakeholders forum - Stakeholder forum newsletter produced
WP1
MS38
30 September 2026
Fourth Stakeholders forum - Stakeholder forum newsletter produced
WP1
MS39
30 April 2024
Video for healthcare professionals developed in English produced with guidance for NMG on how to adapt it to local languages
WP1
MS40
30 April 2024
Video for citizen engagement developed in English produced with guidance for NMG on how to adapt it to local languages
WP1
MS41
Initial definition of the process to validate distributed learning models to be deployed on the GDI available
WP1